Fluids

Fluids

Topics relate to Fluent, CFX, Turbogrid and more

Facing issue to run FSI simulation in HPC

    • Swapnil
      Subscriber

      I am trying to run FSI simulation in HPC cluster but I am facing the following errors.

      The system coupling lof file has following:

      Awaiting connections from coupling participants...
      Elapsed time: 5 min. Still awaiting connection from: MAPDL-2. If you feel the participant(s) should already have connected, check participant logs and/or abort the run.
      Elapsed time: 10 min. Still awaiting connection from: MAPDL-2. If you feel the participant(s) should already have connected, check participant logs and/or abort the run.

       

      The fluent .trn file has following:

      Auto-Transcript Start Time:  08:49:58, 15 May 2024 
      Current Directory: "/lfs/usrhome/phd/me20d013/Swapnil/FSI_pulsatile/Fluid_run"
      application-specific initialization failed: Can't find a usable init.tcl in the following directories: 
          /home2/polyflowbuilds/buildagents/milpolybld01/work/1210bc2a0080eb69/Tcl-tk/8_5_11/linx64/Release/tcltk/lib/tcl8.5 /usr/lib/tcl8.5 /lib/tcl8.5 /usr/library /library /tcl8.5.11/library /tcl8.5.11/library
       
       
       
      This probably means that Tcl wasn't installed properly.
       
      /lfs/sware/ansys2023r2/ansys_inc/v232/fluent/fluent23.2.0/bin/fluent -r23.2.0 3ddp -pshmem -host -t1 -mpi=intel -path/lfs/sware/ansys2023r2/ansys_inc/v232/fluent -ssh -cx cn008.ib0.cm.aqua.iitm.ac.in:36013:33915
      application-specific initialization failed: Can't find a usable init.tcl in the following directories: 
          /home2/polyflowbuilds/buildagents/milpolybld01/work/1210bc2a0080eb69/Tcl-tk/8_5_11/linx64/Release/tcltk/lib/tcl8.5 /usr/lib/tcl8.5 /lib/tcl8.5 /usr/library /library /tcl8.5.11/library /tcl8.5.11/library
       
       
       
      This probably means that Tcl wasn't installed properly.
       
      Starting /lfs/sware/ansys2023r2/ansys_inc/v232/fluent/fluent23.2.0/lnamd64/3ddp_host/fluent.23.2.0 host -cx cn008.ib0.cm.aqua.iitm.ac.in:36013:33915 "(list (rpsetvar (QUOTE parallel/function) "fluent 3ddp -flux -node -r23.2.0 -t1 -pshmem -mpi=intel -ssh") (rpsetvar (QUOTE parallel/rhost) "") (rpsetvar (QUOTE parallel/ruser) "") (rpsetvar (QUOTE parallel/nprocs_string) "1") (rpsetvar (QUOTE parallel/auto-spawn?) #t) (rpsetvar (QUOTE parallel/trace-level) 0) (rpsetvar (QUOTE parallel/remote-shell) 1) (rpsetvar (QUOTE parallel/path) "/lfs/sware/ansys2023r2/ansys_inc/v232/fluent") (rpsetvar (QUOTE parallel/hostsfile) "") (rpsetvar (QUOTE gpuapp/devices) ""))"
      application-specific initialization failed: Can't find a usable init.tcl in the following directories: 
          /home2/polyflowbuilds/buildagents/milpolybld01/work/1210bc2a0080eb69/Tcl-tk/8_5_11/linx64/Release/tcltk/lib/tcl8.5 /usr/lib/tcl8.5 /lib/tcl8.5 /usr/library /library /tcl8.5.11/library /tcl8.5.11/library
       
       
       
      This probably means that Tcl wasn't installed properly.
       
       
                    Welcome to ANSYS Fluent 2023 R2
       
                    Copyright 1987-2023 ANSYS, Inc. All Rights Reserved.
                    Unauthorized use, distribution or duplication is prohibited.
                    This product is subject to U.S. laws governing export and re-export.
                    For full Legal Notice, see documentation.
       
      Build Time: May 29 2023 07:35:15 EDT  Build Id: 10212  
       
      Connected License Server List: 1055@cclicserver.iitm.ac.in
       
      *********************************************
      Info: Your license enables 4-way parallel execution.
      For faster simulations, please start the application with the appropriate parallel options.
      *********************************************
       
       
           --------------------------------------------------------------
           This is an academic version of ANSYS FLUENT. Usage of this product
           license is limited to the terms and conditions specified in your ANSYS
           license form, additional terms section.
           --------------------------------------------------------------
      Host spawning Node 0 on machine "cn008" (unix).
      application-specific initialization failed: Can't find a usable init.tcl in the following directories: 
          /home2/polyflowbuilds/buildagents/milpolybld01/work/1210bc2a0080eb69/Tcl-tk/8_5_11/linx64/Release/tcltk/lib/tcl8.5 /usr/lib/tcl8.5 /lib/tcl8.5 /usr/library /library /tcl8.5.11/library /tcl8.5.11/library
       
       
       
      This probably means that Tcl wasn't installed properly.
       
      /lfs/sware/ansys2023r2/ansys_inc/v232/fluent/fluent23.2.0/bin/fluent -r23.2.0 3ddp -flux -node -t1 -pshmem -mpi=intel -ssh -mport 172.20.8.8:172.20.8.8:32877:0
      application-specific initialization failed: Can't find a usable init.tcl in the following directories: 
          /home2/polyflowbuilds/buildagents/milpolybld01/work/1210bc2a0080eb69/Tcl-tk/8_5_11/linx64/Release/tcltk/lib/tcl8.5 /usr/lib/tcl8.5 /lib/tcl8.5 /usr/library /library /tcl8.5.11/library /tcl8.5.11/library
       
       
       
      This probably means that Tcl wasn't installed properly.
       
      application-specific initialization failed: Can't find a usable init.tcl in the following directories: 
          /home2/polyflowbuilds/buildagents/milpolybld01/work/1210bc2a0080eb69/Tcl-tk/8_5_11/linx64/Release/tcltk/lib/tcl8.5 /usr/lib/tcl8.5 /lib/tcl8.5 /usr/library /library /tcl8.5.11/library /tcl8.5.11/library
       
       
       
      This probably means that Tcl wasn't installed properly.
       
      application-specific initialization failed: Can't find a usable init.tcl in the following directories: 
          /home2/polyflowbuilds/buildagents/milpolybld01/work/1210bc2a0080eb69/Tcl-tk/8_5_11/linx64/Release/tcltk/lib/tcl8.5 /usr/lib/tcl8.5 /lib/tcl8.5 /usr/library /library /tcl8.5.11/library /tcl8.5.11/library
       
       
       
      This probably means that Tcl wasn't installed properly.
       
      Starting /lfs/sware/ansys2023r2/ansys_inc/v232/fluent/fluent23.2.0/multiport/mpi/lnamd64/intel2021/bin/mpirun --rsh=ssh -f /tmp/fluent-appfile.me20d013.1056 -genv FI_PROVIDER tcp -genv FLUENT_ARCH lnamd64 -genv I_MPI_DEBUG 0 -genv I_MPI_ADJUST_GATHERV 3 -genv I_MPI_ADJUST_ALLREDUCE 2 -genv I_MPI_PLATFORM auto -genv PYTHONHOME /lfs/sware/ansys2023r2/ansys_inc/v232/fluent/fluent23.2.0/../../commonfiles/CPython/3_10/linx64/Release/python -genv FLUENT_PROD_DIR /lfs/sware/ansys2023r2/ansys_inc/v232/fluent/fluent23.2.0 -genv FLUENT_AFFINITY 0 -genv I_MPI_PIN enable -genv KMP_AFFINITY disabled -n 1 /lfs/sware/ansys2023r2/ansys_inc/v232/fluent/fluent23.2.0/lnamd64/3ddp_node/fluent_mpi.23.2.0 node -mpiw intel -pic shmem -mport 172.20.8.8:172.20.8.8:32877:0
       
      -------------------------------------------------------------------------------
      ID    Hostname  Core  O.S.      PID   Vendor                     
      -------------------------------------------------------------------------------
      n0    cn008     1/40  Linux-64  1117  Intel(R) Xeon(R) Gold 6248 
      host  cn008           Linux-64  788   Intel(R) Xeon(R) Gold 6248 
       
      MPI Option Selected: intel
      -------------------------------------------------------------------------------
       
      Cleanup script file is /lfs/usrhome/phd/me20d013/Swapnil/FSI_pulsatile/Fluid_run/cleanup-fluent-cn008-788.sh
       
       +------------------------------------------------------------------+
       |                    ANSYS Product Improvement                     |
       |                                                                  |
       |   ANSYS Product Improvement Program helps improve ANSYS          |
       |   products. Participating in this program is like filling out a  |
       |   survey. Without interrupting your work, the software reports   |
       |   anonymous usage information such as errors, machine and        |
       |   solver statistics, features used, etc. to ANSYS. We never      |
       |   use the data to identify or contact you.                       |
       |   The data does NOT contain:                                     |
       |   - Any personally identifiable information including names,     |
       |     IP addresses, file names, part names, etc.                   |
       |   - Any information about your geometry or design specific       |
       |     inputs.                                                      |
       |   You can stop participation at any time. To change your         |
       |   selection go to Help >> ANSYS Product Improvement Program      |
       |   in the GUI.                                                    |
       |   For more information about the ANSYS Privacy Policy, please    |
       |   check: http://www.ansys.com/privacy                            |
       |                                                                  |
       +------------------------------------------------------------------+

      whereas mechanical.stdout file has following:

      application-specific initialization failed: Can't find a usable init.tcl in the following directories: 
          /home2/polyflowbuilds/buildagents/milpolybld01/work/1210bc2a0080eb69/Tcl-tk/8_5_11/linx64/Release/tcltk/lib/tcl8.5 /usr/lib/tcl8.5 /lib/tcl8.5 /usr/library /library /tcl8.5.11/library /tcl8.5.11/library
       
       
       
      This probably means that Tcl wasn't installed properly.
       
      application-specific initialization failed: Can't find a usable init.tcl in the following directories: 
          /lfs/sware/ansys2023r2/ansys_inc/v232/commonfiles/Tcl/lib/tcl8.4 /lfs/sware/ansys2023r2/ansys_inc/v232/commonfiles/Tcl/lib/tcl8.5 /home2/polyflowbuilds/buildagents/milpolybld01/work/1210bc2a0080eb69/Tcl-tk/8_5_11/linx64/Release/tcltk/lib/tcl8.5 /usr/lib/tcl8.5 /lib/tcl8.5 /usr/library /library /tcl8.5.11/library /tcl8.5.11/library
       
      /lfs/sware/ansys2023r2/ansys_inc/v232/commonfiles/Tcl/lib/tcl8.4/init.tcl: version conflict for package "Tcl": have 8.5.11, need exactly 8.4
      version conflict for package "Tcl": have 8.5.11, need exactly 8.4
          while executing
      "package require -exact Tcl 8.4"
          (file "/lfs/sware/ansys2023r2/ansys_inc/v232/commonfiles/Tcl/lib/tcl8.4/init.tcl" line 19)
          invoked from within
      "source /lfs/sware/ansys2023r2/ansys_inc/v232/commonfiles/Tcl/lib/tcl8.4/init.tcl"
          ("uplevel" body line 1)
          invoked from within
      "uplevel #0 [list source $tclfile]"
       
       
      This probably means that Tcl wasn't installed properly.
       
      application-specific initialization failed: Can't find a usable init.tcl in the following directories: 
          /lfs/sware/ansys2023r2/ansys_inc/v232/commonfiles/Tcl/lib/tcl8.4 /lfs/sware/ansys2023r2/ansys_inc/v232/commonfiles/Tcl/lib/tcl8.5 /home2/polyflowbuilds/buildagents/milpolybld01/work/1210bc2a0080eb69/Tcl-tk/8_5_11/linx64/Release/tcltk/lib/tcl8.5 /usr/lib/tcl8.5 /lib/tcl8.5 /usr/library /library /tcl8.5.11/library /tcl8.5.11/library
       
      /lfs/sware/ansys2023r2/ansys_inc/v232/commonfiles/Tcl/lib/tcl8.4/init.tcl: version conflict for package "Tcl": have 8.5.11, need exactly 8.4
      version conflict for package "Tcl": have 8.5.11, need exactly 8.4
          while executing
      "package require -exact Tcl 8.4"
          (file "/lfs/sware/ansys2023r2/ansys_inc/v232/commonfiles/Tcl/lib/tcl8.4/init.tcl" line 19)
          invoked from within
      "source /lfs/sware/ansys2023r2/ansys_inc/v232/commonfiles/Tcl/lib/tcl8.4/init.tcl"
          ("uplevel" body line 1)
          invoked from within
      "uplevel #0 [list source $tclfile]"
       
       
      This probably means that Tcl wasn't installed properly.
       
      /lfs/sware/ansys2023r2/ansys_inc/v232/ansys/bin/linx64/ansys.e: error while loading shared libraries: libGLU.so.1: cannot open shared object file: No such file or directory

       

      How to resolve this issue?

    • MangeshANSYS
      Ansys Employee

      Hello

      1. please check all prerequisites (required libraries) are installer per https://ansyshelp.ansys.com/account/secured?returnurl=/Views/Secured/corp/v232/en/installation/unix_platform_libraries.html
      2. please check if there is a firewall running on the nodes which might be keeping the 2 processes from communicating
      3. please also see the environment variable references in these two threads to overcome issue with systen coupling
        /forum/forums/topic/ansys-system-coupling-error-on-university-hpc/
        /forum/forums/topic/2-way-fsi-structural-and-cfx-issue-in-ansys-2023r1-and-2023r2/
Viewing 1 reply thread
  • You must be logged in to reply to this topic.