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Hello,
Is the example that you are using the SWG_bandstructure.fsp and the associated SWG_analyze_bandstructure.lsf script file?
If yes, as you can see in line 31 of the script file, the w_high_res parameter is calculated using the polynomial fit calculated in line 25. The wavelength is then calculated using this w_high_res parameter.
Different results can give different fits and hence different w_high_res and wavelengths.Â
Since you cannot avoid the polynomial fit, unless you create a new workflow, the easiest way to get effective index results at the same wavelengths would be probably by interpolating the data using the interp - script command. You can try to check if the data are interpolated properly.
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Best Regards,
Afroditi